YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|119181653, gi...
Protein type:	Transmembrane
Type Confidence:	0.95
Topology Confidence:	0.81
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLFLIPIST RRTLLYCQKT TGGVATQLSV IDRITNKAAV TWVQWEEAEQ GWKKALTTYG  60
   61 HRVLQKIPYE EWGLKSVPPL SAKREAQELK SHSPVELLYP GNVIHQSRIL GTLRKLATER 120
  121 QDLHRRRMWW SLGVAPLTAP IALIPLIPNI PFFYLAYRGW SHWRALNGSK HLEFLLDNHL 180
  181 VNPTSLPGLE DLYSRHQGLL PKLPPDETPV VDEKSGSNQQ PQDDPPDETI LLDISDGKDL 240
  241 AKMLQAPELH AEVERAVTQV RHLLNLKKQP K

Type	Start	End	Confidence
Cytoplasmic	1	128	0.86
Transmembrane Helix	129	152	0.81
Non-Cytoplasmic	153	271	0.90