YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	DRE2_COCIM
Protein type:	Globular with Signal Peptide
Type Confidence:	0.56
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MERMLLLSPP SLAARPERLN TILSSHSRYA TDLQMLDRVA AGLVSLPQST YDIVMLLTDV  60
   61 DGLGTGSTSA MGRGVIQSVV RALRPGGKFK RENGTFTSTE CPDNTELMLA GLVFDDTGGL 120
  121 LKPDFGPENI VPLKLGKRKP VHSVSSNGTG TSGPHVNMQL STGSMLKGQT TTIKGVGFVD 180
  181 FTDDPSLSEA DIYSGQTDDE LIDEETLLDG EDMGRPIIQP PECRPKAGKR RRACKDCTCG 240
  241 LAERLREEDK AARAKADATL ETMKLAPKEL AEVDFTVQGK LGSCGNCALG DAFRCDGCPY 300
  301 IGLPPFKPGE EVRLLSNDVQ L

Type	Start	End	Confidence
Signal Peptide	1	13	0.56
N-region	1	4
H-region	5	10
C-region	11	13
Cleavage Site	13	14
Non-Cytoplasmic	14	321	0.99