YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|119176010, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.71
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDGASDKIGR PVGSPGTNAQ PGEPAARVDT PSNTGENEHA PSLQDEKGFH PIRSENPREP  60
   61 QSSTGSGPES SESEAALLYR RDTQHAKREE VDDGVETVTP SRQPLYEQTS RSTAPSSRDE 120
  121 EWANLQHILS NMFGRARQEV SEEEKSRHVG LVWKNLTVKG VGLGATLQPT NSDILLALPR 180
  181 LFGRLFTGKI RNRKPVRTIL DDFTGCVKPG EMLLVLGQPG SGCSTFLKVL GNQRAGYEAV 240
  241 DGEVTYGGAD AKTMAQKYRS EVLYNPEDDL HYATLTAKQT LNFAIRTRTP GKESRKPGES 300
  301 RRQYRETFLT SVAKLFWIEH CLDTRVGNAL VRGVSGGEKK RVSIAEALIT KASTQCWDNS 360
  361 TRGLDASTAL EYVQCLRSLT TMTHVSTSVA IYQASESLYK LFDKVILLTE GKCAYFGPTS 420
  421 DAKAYFENLG FECPPRWTTA DFLTSVTEPH ARRVKSGWEN RIPRSAEQFK RAYDESAVRK 480
  481 VAMESIAELE DEIEAKKGEL EDIRRRTPKK NFTIPYYQQV IALSGRQFMI MIGDRESLLG 540
  541 KWCVILFLAL IVGSLFYNLP KNSQGVFTRG GVMFYIILFN ALLSMAELSS TFESRPILMK 600
  601 HKSFSFYRPS AYALAQVVVD VPLVFTQVFI FLIIVYFMAD LARTASQFFI ALLFVWLVTM 660
  661 VMYSFFRAIG ALVTSLDAAT RVTGVAIQAL VVYTGYLIPP GEMRPWLKWL IWINPVQYTF 720
  721 ESLMANEFYN LRIECVGPNL VPQGPNASPE FQSCTVQGSE PGQTFVDGSA YIFSNYGYTR 780
  781 DHLWRNFGII IALLVLFIVL TMVGTEIQAS SHSSAHSTAA VTVFMRGQVP RSVKHEMQNS 840
  841 KKGLDEEEGK QSVLSNGSES DAIEDKEVQA ISRNAATLTW QGVNYTIPYK RTRKTLLQDV 900
  901 QGYVKPGRLT ALMGASGAGK TTLLNVLAQR VDFGVVTGTF LIDGKPLPKS FQRATGFAEQ 960
  961 ADIHEPTSTV RESLQFSALL RRPPEVSIQE KYDYCERILD LLELQPIAGA TIGHVGAGLN1020
 1021 QEQRKRVTIA VELASKPDLL LFLDEPTSGL DSIAAFNIVR FLRKLADVGQ AVLCTIHQPS1080
 1081 SVLFEEFDDL LLLQSGGRVV FHGDLGADSR KLIEYFERNG ARPCPPDANP AEYMLDVIGA1140
 1141 GNPDYKGPDW ADIWASSPEH ETVTNEIKRI VHSSAQEGSP AGTAGQREFA MPKRTQILAT1200
 1201 AKRSFIAYWR TPNYTIGKFM LHIWTGLFNT FTFWHIRDST IDMQSRLFSV FLSLVIAPPL1260
 1261 IQQLQPRYLH FRGLYESREE KSKIYTWFAL ITSIILPELP YSVVAGTLFF CCWYFGTWFP1320
 1321 RNSFAVGFTW MLLMVFEVFY VTFGQMIASI SPNELFASLL VPAFFTFVVS FCGVVVPFQG1380
 1381 IPYFWRSWMY WLTPFRYLLE GYLGVVTNKI PVRCSENEFA RFRPPPGLTC EDYAGPFVEQ1440
 1441 RGGYVITDGS GMCALCQYAN GNEFAASFNV FYKYKWRDYA IFWSYVVFNI LAVYILSWLY1500
 1501 LHGFPALRRK LNSRMMRETR 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle