YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|119173092, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.55
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLPARLLVRG GVRTARLGVA TPLIKLSATV PCLGSQRRGY APGSAPYLST RSTVVQLLSN  60
   61 IGSKREVQQY LSHFTSVSSQ QFAVIKVGGA IITEHLQTLS SALAFLNHVG LYPIVVHGAG 120
  121 PQLNKLLEAA GVEPQFEDGI RVTDGKTLAL ARSLFLEENL KLVEELERLG VRARPLTTGV 180
  181 FSADYLDKEK YNLVGKINGV NKKPIEGAIK AGCLPILTSM AETPDGQVLN VNADVAAGEL 240
  241 ARALQPLKIV YLAEKGGLFN GDTGEKISAI NLDEEYDDLM KLWWVRHGTR LKIKEMKELL 300
  301 NDLPRTSSVA IIHPADLQKE LFTDSGAGTL IRRGNKLHIK SSIDDFEDLH TLRNALVRDR 360
  361 EGLDAKATVD RYIQALRGLE FKAYFDEPMD ALAVILPPKK GSSFARLSTL TITKAGWLTN 420
  421 VADNVFSSIQ KDFPKLVWTV KEDDENLTWF FDKAQGSLNR DGEVLFWSGV NSPEEVGELV 480
  481 HEFSKRGSDM FGDINLEPKL PTSAGGGAKL AAAQQKRTFS TSANTSALRA FGSQKFRANT 540
  541 QSIRSYTTTN PNPPLGKKNA SNTQPSRVAL IGARGYTGQA LINLLNNHPY MDLRHVSSRE 600
  601 LAGKPLQGYD KRPITYEELS PDDVKRMAEQ GTVDCWVMAL PNLVCKPYVD AINEVDKEKA 660
  661 VIIDLSADYR FDSTWTYGLP ELVNRGSIAQ AKRIANPGCY ATAAQLGIAP LVPFLAGQPT 720
  721 VFGVSGYSGA GTKPSPKNDV ANLTNNIIPY SLTDHIHERE VSTQLGVDVA FIPHVAVWFQ 780
  781 GIHQTISMPL KESMTSRDIR NLYQDRYAGE KLVKVVGEAP VVKDIAGRHH VEIGGFAVHS 840
  841 SGKRVVVCAT IDNLLKGAAT QCLQNMNLSL GYSEFEGIPE EK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle