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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|90297951, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRGVSQSLWI SALAILSIND SVNAHAKCTT LEPPTLNDGT HQDSNESLLW GPYRPNLYFG  60
   61 VRPRVPKSLL MGLMWAKVDE YSSAQGNFRH TCEQNEGMAG YGWDEYDIRK GGRQTIHDAG 120
  121 NTLDLTIDFI KVPGGSHGGS WGARIKGQPR PDAPPDQPTT MIFYAAMEGL GKLGVANEGD 180
  181 PLGFKDNVKL SGSTMELGEF TIDITRGPDT NSHPPNTHPS HDVKPLDRSF VASLQLQPDL 240
  241 LWQAKTSNSE QEVDPLIRKY GTENPPPPSR YFTIANGPGH GNFHMVQKVF QGAFEFDILL 300
  301 SSGSAGQPLT SDVLSKEIKT TAQAFEDKFK EIYSPMKPFD SPKYLPFSKA MLSNLVGGIG 360
  361 YFYGDSIVDR SNAPEYDEED EGFWEGTAEA RARAKLLPSD PAELFTSIPS RPFFPRGFLW 420
  421 DEGFHLMPIV DWDLDLGLQI VKSWFNLMDD DGWIAREQIL GPEARSKVPP EFQVQYPHYA 480
  481 NPPTLFMILE DLVDKMEAGI STSGSDAASG ICSKDLEAAK AYLRSLYPLL KRQYFWFRKT 540
  541 QWGDIKSYDR EAFSTKEAYR WRGRTVELVL TSGLDDYPRA QPPHPGELHV DLISWMGLMT 600
  601 RSLRRIAGAL GETEDVDEFG KYENAIKRNI DDLHWDEAKK TYCDATIDEF EESVHVCHKG 660
  661 YISLFPFLTR MLEPDSPRLG HILDLISDPE ELWSEYGIRS LSKKDELYGT GENYWKSPIW 720
  721 ININYLILKN LLDLATAPGP YQKQASEMYT KLRKNVVDNV FNEWKRTGFA WEQYNPETGH 780
  781 GQRTQHFTGW TSLVVKMMAM PDLSAGSTEA VRDEL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle