YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|119192530, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.58
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDYSNIFRLV NLAIGVIMVL GGISQFFADP KFRNIIIGIY VILFGLATGA LELVPNVPTQ  60
   61 ITRHTSFMFS FIGRGIFYIF VGCIILEHHV LRIIAGSIVG IVGVAYVALE YIPSIEPPQN 120
  121 MREAEPAWGA EQI

Type	Start	End	Confidence
Cytoplasmic	1	6	0.61
Transmembrane Helix	7	28	0.91
Non-Cytoplasmic	29	34	0.57
Transmembrane Helix	35	55	0.93
Cytoplasmic	56	64	0.52
Transmembrane Helix	65	86	0.87
Non-Cytoplasmic	87	92	0.44
Transmembrane Helix	93	112	0.90
Cytoplasmic	113	133	0.58