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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|90305823, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.43
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSGRPPGGH PSAAGNNDLL QLDDTPVYGS GQRAPVNDDH LLERYDIDDS DLPSPRASVS  60
   61 YDEFVGGRHP STRAGASSNV PHQDGLQPPS ASSQFYGGGP ATRTYSQTSD LHNYQRYSDI 120
  121 DDFDDERGYY PEADLDGDHL PIRDARARDR NSILTLGGGL VGRAKTMLGM APKYSEMDLP 180
  181 LTEAGARARA DTVGTEGEPR PKSKRRSAGD FKFGFGRRKP DPATLGPRVI YLNNSPANQA 240
  241 NKYVDNHIST AKYNVFTFLP KFLFEQFSKY ANLFFLFTAA LQQIPNISPT NRYTTIGPLI 300
  301 IVLLVSAIKE LIEDFKRKNS DKSLNYSKTR VLRGAGFEET RWIDVSVGDI LRVESEEPFP 360
  361 ADLVLLASSE PEGLCYIETA NLDGETNLKV KQAIPETSDL VSPGQLSRLA GRVKSEQPNS 420
  421 SLYTYEATLT MHSGGGEKEL PLAPDQLLLR GATLRNTPWI HGVVVFTGHE TKLMRNATAT 480
  481 PIKRTAVERM VNLQILMLVA ILIALSLISS IGDLIVRITA SKNLSYLDYG NVNAAAQFFS 540
  541 DIFTYWVLYS NLVPISLFVT IEIVKYCHAF LINSDLDIYY DKTDTPATCR TSSLVEELGQ 600
  601 IEYIFSDKTG TLTCNMMEFK QCSISGIQYA EVVPEDRRAT DDDDSDTAMY DFKRLRQNLE 660
  661 SHQTRDAIKQ FLTLLSTCHT VIPERKDEKP GEIKYQAASP DEGALVEGAV LLGYQFTNRK 720
  721 PRSVIISANG EEEEYELLAV CEFNSTRKRM STIFRCPDGK IRIYCKGADT VILERLHSNN 780
  781 PIVDVTLQHL EEYASEGLRT LCLAMREIPE EEFQQWWQIF DKAATTVSGN RAEELDKAAE 840
  841 LIEKDFYLLG ATAIEDRLQD GVPDTIHTLQ QAGIKIWVLT GDRQETAINI GMSCKLISED 900
  901 MTLLIINEEN AEGTRESLSK KLQAVQSQTG SDIETLALVI DGKSLTFALE RDMEKLFLDL 960
  961 AVQCKAVICC RVSPLQKALV VKLVKRHLKS LLLAIGDGAN DVSMIQAAHV GVGISGVEGL1020
 1021 QAARSADVSI AQFRFLRKLL LVHGAWSYQR ISKVILYSFY KNIALYMTQF WYSFQNSFSG1080
 1081 QVIYESWTLS FYNVFFTVLP PFAMGIFDQF ISARLLDRYP QLYHLGQKGV FFKMHSFFSW1140
 1141 VGNGFYHSLI AYFLSQAIFL YDLPTKDGTV AGHWVWGTAL YTAVLATVLG KAALVTNIWT1200
 1201 KYTVLAIPGS FLIWMGFIPA YAYAAPNIGA GFSTEYRGII PHLFPLPTFW LMAIVLPAIC1260
 1261 LLRDFAWKYA KRMYYPQSYH HVQEIQKYNV QDYRPRMEQF QKAIRKVRQV QRMRKQRGYA1320
 1321 FSQADEGGQM RVVNAYDTTR GRGQYGEMAS SRPMI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle