YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|119194039, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVFLGKILPL ALAALSVNGA EILSAPGAEN IPNGYIVVMK EGTSTQDFDA HREWVASVHH  60
   61 ERLARRGSTN VGGMRHTYNF NQGFMGYAGT FDEETIQEIA NRDDVAYIER DQIMKASAIQ 120
  121 TQRNVPSWGL ARVSSRQPGG RDYSYDSTAG QGVTAYIIDT GIDIRHTDFG GRAVWGTNTV 180
  181 DRRNEDCNGH GTHVAGTTGG TSFGVAKRAR LVAVKVLDCN GSGSNSAVIA GMQWAMQHAS 240
  241 QNDPRRAVAN MSLGGGYSQA TNQAAAAIVR AGIFLAVAAG NDNRDARSFS PASEPTVCTA 300
  301 AASHVRDGKA SFSNWGQLVD VYAPGQDIIS ARPGGGSRSL SGTSMASPHV CGLGAYLIGL 360
  361 GRGSGGGLCD TIKRMALPVI SNPGSGTTNR LINNGVSQ

Type	Start	End	Confidence
Signal Peptide	1	19	0.99
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	398	0.98