YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|110594248, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.94
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSRAMPAGA WRSTCSTRRA RVRRLPPRRQ RSRSQPSRAP ASTASSPLLY CSRDCSACGS  60
   61 RGRYCKAAAR PGPGRTHGTN GQRQHPAALQ GPPRGPAARA FTQQSTLLKG PRVLRQSQHM 120
  121 THSYILTLSC PDRLGLVHAV SGFLLDHGGN IEEAAQYNDQ GTGLFFMRVQ FACESTDEAT 180
  181 LKAELATFAE EHSMRWSLHA TSAAMKTVLM VSKEGHCLND LLFRYKSGLL PIDIRAIISN 240
  241 HRDFYQLAAS YNIPFHHIPV TAATKAQAEA KQYEIIQAEG AELVVLARYM QVLSNDLCTK 300
  301 LSGRAINIHH SFLPSFKGAK PYYQAHDRGV KLIGATAHYV TADLDEGPII EQDVTRADHT 360
  361 DTVEDLTARG RDTESQVLAR AVKWHSEHRV LLNGHKTVVF R

Type	Start	End	Confidence
Signal Peptide	1	57	0.92
N-region	1	48
H-region	49	54
C-region	55	57
Cleavage Site	57	58
Non-Cytoplasmic	58	401	0.99