YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|125861736, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVRKIGSLLA LTGLILTLSL FSAGCTGTET EAKEVSIGYV TWDCAIASSN VMKQVFEEAG  60
   61 YDVEMVAVDA GPLFQALASG DVDFTTTGWL PHTHAHYWEQ YGDQIDYVNE NIPGAARIGL 120
  121 VVPTYVTIDS IEEMNDVSDQ FDGRIVGIEP GAGIMTRTEQ AIDEYDLNYE LVASSSAGMA 180
  181 AELSSAISGE EWVVVTGWSP HWKFGRFDLK FLEDPKGVYG GAEDVVTLAR QGLAEDDPEA 240
  241 YAILERFEWT AEDIALVMTD IEGGMSEEEA AQKWIDANRD KVDVWLGNA

Type	Start	End	Confidence
Signal Peptide	1	27	0.95
N-region	1	18
H-region	19	24
C-region	25	27
Cleavage Site	27	28
Non-Cytoplasmic	28	289	0.99