YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|111615182, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.78
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNKLFPSAAE ALAGVVADGQ LLAVGGFGLC GIPEALIDAL RDSGVRNLTV ISNNAGVDGF  60
   61 GLGKLLSTGQ IKKMIASYVG ENKEFERQYL AGELELEFTP QGTLAEKLRA GGAGIPAFFT 120
  121 KTGVGTMVAE GKELREFDGQ TYVMERALRP DVALVKAHRA DRSGNLQFRL TARNFNPAAA 180
  181 MAGKVCIAEV QELVDTGAME PDQVHLPGIY VHRIVHNPNP EKRIEKRTIS AKAGA

Type	Start	End	Confidence
Signal Peptide	1	19	0.75
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	235	0.97