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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|111611335, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.56
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGFHHFGGVY GQRVGRDAAR VGLHHLGRRG AAQFGPGFDA AAQVAVGEDA QHLAGRIHDG  60
   61 RCAQALGAHL AHQRAEAGLG WHARNLRATA HDIAHMGEQF APERAAGVRS GKVFGAEPTG 120
  121 VEQRHGQGIA HCQLGRGAGR GGQVQRAGFA LYAAVEHQLG MARQRGLQTA GQRDQRGAQA 180
  181 PEHRQDGRQF GAFAAVGKRQ HQIVAGDHAQ VAMAGLGGVD EECGGAGRGQ RGGNLAPHMA 240
  241 ALAHAHDDHA APGSEHQLHG LGEHAIHPGR QPGQRRRFDV KGRAGHAQGL LGVERGQRGA 300
  301 GAGHAGILST GVWRASGMAR LSDSIRAMSS LALTLMYLLA AVLGVVACRS LKLPPMLGYL 360
  361 VAGVLIGPHA LALAQNSEGV RHLGEFGVVF LMFAIGLEFS LPKLRAMRRQ VFGLGLMQVV 420
  421 ATMALVTGVA LLLSHWIGGV WDMGWQTALA LSGVMTMSST AIVVKLMVER AELESGHGRW 480
  481 VMGVLLFQDL AVVPLLVLIP ALGSAPGQLL PALAWALLKA ILLVGLLLIG GQRLMRWWLT 540
  541 LVARRKSDEL FMLNLLLITL GLAWLTELAG LSLALGAFIA GVLVSETEYR HQVGTDIRPF 600
  601 HDVLLGLFFI TIGMLLDWHI LLERWALVLA LLTVSLIFKL AIILALARGM GATAGVALRT 660
  661 GLYLAQAGEF GFVLLSLTSS NGLVQAALMN PILAAMVLSM LATPFLIMHS NRIVMRLVAS 720
  721 DWLQQSLQMT SIARKSINTS GHVLICGYGR CGQNLARMLE HERIPYMALD LDPDRVRQAA 780
  781 AAGDSVVYGD ATRLQALMAA GLVRASAVAI TYADVPAALK VLANARSHAP QVPVVVRTQD 840
  841 DLHLDVLQRA GATEVVPETI EGSLMLASHA LALVGVPMRR VLRLVQAQRD ARYQLLRGYF 900
  901 HGADDDTVNE IDQERLSSIN LPAGSTALGK SLGQLALPAI GVRVVSLRRS DGRQGAAVDA 960
  961 ALLAEGDTLV LSGHPAALIL AQDKLLRG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle