YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|169620209, gi...
Protein type:	Transmembrane
Type Confidence:	0.96
Topology Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLFLLPIST RRSLIYCERV HEKAPKDRSV IDKVTIKANE TWAAWEKDEK AVGNWKKKVT  60
   61 FYGNQAMKRI PYEEWGLKTL PSLTASRKQA ILDGKEKYEV LFPGRYLKQE KLPGILEKLA 120
  121 KERQLMHRSK LIWSIVIMPF TAPFMLVPVI PNLPFFYVLY RAYSHWTALN GSKFLEHLLK 180
  181 HNLPTPKASW ALDEVYTAGL MYPTRQLSRA APNPTEQQAE EVAAVVHKQT NNETKDVMVL 240
  241 QRWNGKLIAE QFDLPDMEVE IERAVEQVET SIKGKEELME EKLELERAAG KTDARAKDEL 300
  301 PEHITEKIHE QAENVADRAK KQAEEGVKKA QESS

Type	Start	End	Confidence
Cytoplasmic	1	130	0.94
Transmembrane Helix	131	150	0.91
Non-Cytoplasmic	151	334	0.92