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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|169596911, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.61
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTAARTTGA EAQSEELRRR NVASQAETTP VVAAAPTREK SKEKAFDIIS FLDEYEFIWA  60
   61 PLIFTFFAFF TRMYKIGLSP IVTWDEAHFG KFGSHYLKRE FYFDVHPPLG KMLVGLSGYL 120
  121 AGYNGSFEFK SGETYPEELN YTFMRLFNSA FGAVCVPLAY FTAKELNFRR PTVWFVTLAV 180
  181 LCENSYTTIS RFILLDSMLL CFTFTTVFCW SKFHRQQKDP FSPEWGLWLM LTGVSIGCVC 240
  241 SVKWIGFFVT ALVGLYTIED LWNKFGDLKM PKIELFTHLV FRVFGLILIP LAVYTFNFYL 300
  301 HFLILENSGP GDAQMSSLFQ ANLRGTEVGK DSPLEVAYGS RVTLKNMGYG GGLLHSHVQT 360
  361 YPEGSMQQQI TCYHHKDANN DWFFYPNRHE VDYQPDEELR FPKDKSVIRL IHAQTGRNLH 420
  421 SHAVAAPVTK ADWEVSCYGN TTVGDTKDHW EIQIVRDAAS NDRSKVRTLT TALRFKHVDL 480
  481 GCYLRAGNVN LPQWGFKQIE TTCVKSNNPR DVYTHWNIES HVNDRLPAGN PGDYKSPFFQ 540
  541 DFIHLNVAMM TSNNALVPDP DKQDDLASSF WEWPFLHVGL RMCGWNDDIV KYFLLGNPFV 600
  601 YWGSTASLGI FGLIVIWYTV RWQRGYNDLK QADIDQIHYS GLYPIIGWAL HYVPFVAMGR 660
  661 VTYVHHYYPA LWFAIIVMGF CVDWATRGLN KKVQWGIFSA LYVIIIGLYW LFRAISFGMV 720
  721 GPSSQWSHLK WFDSWRITD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle