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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|111281681, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.63
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGRVLRPAGG RAARGHPPAR GRRRAGRALP RRRAGEAGRP ALHRGPRALR RGGGPGRRPG  60
   61 GGRPGAPDLY PQRNGARHAP VGRARHRPAR ARRARECAAR SRGQPARRPG RAADGPAEPG 120
  121 LHPGARAGRG PRGPHRGHRG QPGGFRGRCA GADHAGVGEP DLRELRYRRA DRGTRAGGPA 180
  181 LRPERPRPHR AHSRADGHGH GRRHAVCGPS AAHRQPGGCE ERHRARARRF RQRRRRAHAG 240
  241 PVRPHPRGPG EEHPGRADQR ACRGHGPEQE VRDGGGRGQQ GRIPRGAAGR AGRWPARRHL 300
  301 GPEGGRAHRR QRPAARAPRR RGRTAGRAHD RQVRTGRRGR AGACRRPPAR SLSAGLQRAE 360
  361 NDTMNLSRFF IDRPIFAGVL SVLIFLAGLI ALRALPISEY PEVAPPSVVV RATYPGANPK 420
  421 VIAETVATPL EESINGVEGM LYMGSQATTD GVMTLTVTFA LGTDPDKAQQ LVQNRVSQAE 480
  481 PRLPEEVRRL GVTTVKSAPD LTMVVHMVSP NGRYDIDYLR NYAVLNVKDR LARIPGVGQV 540
  541 QIFGGGDYSM RAWLDPQKVA QRGLSAGDVV AAIRGQNVQA AAGVVGQSPG LPGVDMQLSI 600
  601 NARGRLATVE EFGDIIVKTG ADGAVTRLRD VARLELGAAD YSLRSLLNND PAVGMGVFQA 660
  661 PGSNALDISA NVRATMAELQ KHMPEGVEFR IAYDPTQFVR ASIQSVIQTL LEAIALVVIV 720
  721 VILFLQTWRA SIIPLLAVPV SVVGTFAVLH LLGFSINALS LFGLVLAIGI VVDDAIVVVE 780
  781 NVERNIEAGL TPREATYRAM REVSGPIIAI ALVLVAVFVP LAFISGLTGQ FYRQFAVTIA 840
  841 ISTVISAINS LTLSPALSAL LLKGHHEPKD ALTRGMDRVL GGFFRRFNRV FHRGSEAYSG 900
  901 GVRRVIGRKA LMLAIYLVLV GATWGLFKAV PGGFVPAQDK QYLVGFAQLP DGATLDRTED 960
  961 VIRRMGKIVK KNPNVEDAIA FPGLSINGFT NSSNAGIVFV TLKPFAERRR ADQSGGAVAG1020
 1021 QLNQAFGSIQ DAFIAMFPPP PVAGLGTTGG FKLQIEDRAS LGYGAMDAAV KAFMAKAYQT1080
 1081 PELAGLFTSW QVNVPQLYAD IDRTKARQLG VPVTDIFETL QIYLGSLYAN DFNQFGRTYS1140
 1141 VRVQADAPYR ARAEDVGLLK VRSTTGEMVP LSALMKIENS FGPERAMRYN GFLSADVNGG1200
 1201 PAPGFSSGQA QAAVERIAAE TLPPGISFEW TELTYQEILA GNSAVLVFPL AILLVFLVLA1260
 1261 AQYESLTLPI AIILIVPMGL MAAMAGVWLT RGDNNVFTQI GLIVLVGLSA KNAILIVEFA1320
 1321 RELEFAGRTP VQAAIEASRL RLRPILMTSL AFVMGVLPLV LSTGAGSEMR SAMGVAVFAG1380
 1381 MIGVTAFGLF LTPVFYVVLR RLAGNRPLQQ HGSHVAPITD AERGAPGHGA SAQPVIAAPR1440
 1441 GRHE

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