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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|94732721
Protein type: Transmembrane
Type Confidence: 0.90
Topology Confidence: 0.79
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALHSNSSSV YVALLFIINY ICITAGSGLS SESSSGLLPP YDELYYRGVR AYFSEDWERA  60
   61 AEFLEKSIST RYKLLRIRRK CHDECLTAGD DKISEQDKED MIFWDLGVLE WIQVRAECVK 120
  121 FCMSRSVSPA ALLPVSSDIE YEFGTRNPYN YLQVTYYKLN KMTKAASAAH TFFVANPSHL 180
  181 EMRNNIEKYK RMLGVKEEFF QDREREHEQH WEMYDAAIQA ESSSDWLKAV KMWNECVNET 240
  241 LKQTEECRAQ CVTAPRVIPE EPDTVQGVYE RAADLSLSMM SCQQTCVTLV STRPGRVSAM 300
  301 EDFLPLQLEH LHIAQFKAGD LKGAVETLRS LLLFYPTDSD NLSNLDLYTQ TLEGDTEAQQ 360
  361 TGPAPEISKY VNRALQEKKL LYFGMANLDF KFSDPDLWTP EDVVPESLRE TWRAEKEQLH 420
  421 EKLKQGDKMD EVDDSGFYAG GPIPVAGVSI TLDDQGLNGT NRVVLDGVLS QSECDRVMQL 480
  481 ATVAASAGDG YRGRRSPHTP HEKFEGLTVL RALKLAQGGL VNQSDARLLH GIGETVKELM 540
  541 DSYFRTPSLL YFAYTHLVCR SAITGHQEGR SDLSHPVHVD NCILEPESRQ CWREAPAFTH 600
  601 RDLSAVLYLN DDFEGGDFFF TDRDAKTVTA TVKPKCGRLV GFTSGPVNPH GVTAVTKGRR 660
  661 CALALWFTTE KHHKDM

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle