YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|106879663
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.76
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KMARSTTKDA QALFRSLRSA YTATPTNLKI IDLYIVFAIA TALVQVVYMA LVGSFPFNSF  60
   61 LSGVLSCVGT AVLAVCLRIQ VNKENKEFKD LPPERAFADF VLCNLVLHLV IMNFLG

Type	Start	End	Confidence
Cytoplasmic	1	29	0.95
Transmembrane Helix	30	52	0.87
Non-Cytoplasmic	53	58	0.80
Transmembrane Helix	59	79	0.93
Cytoplasmic	80	95	0.88
Transmembrane Helix	96	115	0.76
Non-Cytoplasmic	116	116	0.83