YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ugt-23
Protein type:	Transmembrane
Type Confidence:	0.71
Topology Confidence:	0.61
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWTMEMSNPL MMWMNPRILT QLFGKQCTKV MKLSELLDQL KSEKFDLAIT EAFDSCGYGI  60
   61 FEYLQIPAHV SILSCARMDH VSDVLGQPIA PSYVPGTQSL YSDRMTMTQR FLNYLQFLNG 120
  121 NSMFSDIGDY ESANAKKLLG VERSWREILP ESSFLLTNHI PVLEFPAPTF DKIVPIGGIS 180
  181 VNKNKETLKL EHYFDTMVSM RKKNVIISFG SNIKSMDMPD EYKKSLAELF QLMPDVTFIW 240
  241 KYENLADKKY TCGIMNINRV EWIPQTELLA DSRVDAFITH GGLGSVTELA TMGKPAVVIP 300
  301 IFADQTRNAE MLKRHGGAEV LHKTDLANPE TLRKTLRKVM DDPSYRQNAQ RLAEMLNNQP 360
  361 TNPKETLVKH VEFAARFGKL PSMDPYGRHQ NIIEYYNLDI LAIATILLTL VVYLKIFAVG 420
  421 VVVRCCCGKK KVKFE

Type	Start	End	Confidence
Non-Cytoplasmic	1	399	0.97
Transmembrane Helix	400	423	0.61
Cytoplasmic	424	435	0.61