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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|95007169
Protein type: Transmembrane
Type Confidence: 0.75
Topology Confidence: 0.58
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEVSRSHRWP LGSSPHSSSP ALCWSCVSRF SRSICRRGGR FPPLYFSRSS FLLRVLPLVL  60
   61 YSLVSGPSPV SLSFSPSAFS CFSPPFPLTV AAESPSDAAG DASSSLPDGE PLDSTSETAA 120
  121 SESEKRSEDK TQLTEEQMKE KARKAAEAAA AATAKALELG VSVPPLVTAS AGGSDILSTH 180
  181 SAASDAADAA DRTASGFAAD PDKSAVVRAD DMRYQSNPEN STDGEHASSE EEEKPIPVDG 240
  241 GDCIIFAAEE GDRDSCSCPE GFVLCNWQDV QMIQRRLARI ERAARAAAVR VLLLHLDKLP 300
  301 AEELETAPAS RSPSAKESNS ASEADAKVGG ELRGSSSASG DQATDDSRKE EGATDEAETR 360
  361 LEAMLPTDLA EFVKQTAKAA MSLHAPGWVK TLCDDDARTG FKSYGVQIDY EVEAICKDEG 420
  421 TKDAPAVDFI YELTSHHDSF AVELSAFDPS VPVVKNATQR HVEIDKETEL DADTYVPLSR 480
  481 LRKLQEKDSS WTPRHCLVAD FYLCKRLPHK RKKVNCEMSG WSEWSPECVN GTQMRKNRIT 540
  541 RSGQHGGRAC VWDGKQPVHA EVTELRSCNQ PSS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle