YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|84104903, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.95
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASPSSTSNN SAFSPVAASA GTTMPGAGAP CAACKFLRRK CLPGCVFAPY FPPEEPQKFA  60
   61 NVHKVFGASN VTKLLNELLP HQREDAVSSL AYEAEARVKD PVYGCVGAIS VLQRQVHRLQ 120
  121 KELDAAHAEL LRYACGDVAA GIPTALPVVS AAPRLSTAPM TTTSPGQFAA GMYGSGRRLG 180
  181 VVDGLAAPPL PPSGGGGGCY FMRNHHNNVV ISSSPGADVA PVLPYASVAN WAVNAISAST 240
  241 TTTSGSESIG LDHKEGGDSS M

Type	Start	End	Confidence
Signal Peptide	1	33	0.90
N-region	1	24
H-region	25	30
C-region	31	33
Cleavage Site	33	34
Non-Cytoplasmic	34	261	0.99