YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|115314546, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.80
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRFSFSKIM LILGLIFLYI PLIILVVFSF SNSEIINLWG GFTFDWYYEV IHDEDIINAT  60
   61 FTSLKIATIT SAIATILGTI IAYAMTRFKF FRSRSFLYGL VATPLVLPDI ILGVALLLMF 120
  121 STLQHLIGWS HERGTTTVVI AHVTMCTAYV TIVMQSRIAS VDISLEEAAL DLGAGPIETF 180
  181 FKITLPQLIP ALITSALLTF TLSIDDLVVT EFVAGSDNPT LPMYIYSTVK NGPTPEINAL 240
  241 ATIMIGIIVV GVLLGMFISA KFQKRQNG

Type	Start	End	Confidence
Cytoplasmic	1	8	0.97
Transmembrane Helix	9	31	0.91
Non-Cytoplasmic	32	65	0.91
Transmembrane Helix	66	86	0.93
Cytoplasmic	87	95	0.90
Transmembrane Helix	96	120	0.87
Non-Cytoplasmic	121	137	0.75
Transmembrane Helix	138	154	0.93
Cytoplasmic	155	182	0.84
Transmembrane Helix	183	204	0.80
Non-Cytoplasmic	205	238	0.88
Transmembrane Helix	239	260	0.92
Cytoplasmic	261	268	0.91