YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|89256848, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.70
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANHHKLIIL GSGPAGYTAA IYAARANLKP VIITGMQPGG QLTTTTDVDN WPGEPDGIIG  60
   61 PELMEKLQKQ AERFDTQIVY DTINAVDLQN KPFKLVGEVE QYTCDTLIIA TGATAKYLGL 120
  121 ESEEKFMGKG VSACATCDGF FYKNKDVAVV GGGNTAVEEA LFLSNIAKSV TLIHRRDTLR 180
  181 SEKILIDKLM EKAQHGNINI IWNTTLEEVL GDDMGVNALR IKNIKTNEES QIDVAGVFIA 240
  241 IGHTPNTSIF AGQLEMENGY IKVKSGLAGD ATQTNIKGVF AAGDVADHVY KQAVTSAGTG 300
  301 CMAALDAEKY LDNLDQ

Type	Start	End	Confidence
Signal Peptide	1	23	0.67
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	316	0.99