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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|89897256, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.83
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASKTLKIEG MTCAACAKTV ERVTKKLEGV TESNVNLATE KLNISFDEGK LTVGDIQVAV  60
   61 EKAGYKALTD AVSKTMKIEG MTCAACAKTV ERVTRKLEGV NEANVNLATE KLMISYEPSL 120
  121 VGISDIRKAI EKAGYKAIEE ETTVDTDKER KDEERKQLWR RFVLSAIFTV PLLYMAMGHM 180
  181 FGGVIGLRLP MFIDPMMNPL NFALVQLFLT IPVVIAGKKF FTIGFNSLFR GSPNMDSLIA 240
  241 IGTSAAVLYG LYAIAQIYGG NTAYVNQLYF EAAGTIITLI SLGKYLEAVT KGKTSEAIKK 300
  301 LMGLAPKTAL VVRDGKEVII NIDEVEVGDV IIVKPGEKMP VDGEVIEGNT AVDESMLTGE 360
  361 SIPVEKNIGD TIIGASINKN GTIKYRATRV GKDTALAQII KLVEDAQGSK APIAKLADVI 420
  421 SGYFVPIVIG IATLTALAWY FIGGQSTVFA LTIFISVLVI ACPCALGLAT PTAIMVGTGK 480
  481 GAEHGVLIKS GVALETTHKI KTIVFDKTGT ITEGKPKVTD VVVTNGITQS DLLQLAASAE 540
  541 KGSEHPLGEA IVKDAEEQGM EFKKLDSFKA IPGHGIEVDI EGKRLLLGNR KLMVESHVSL 600
  601 GNMEGISDRL AQEGKTPMYI AMDNKLAGII AVADTVKENS KKAIERLHEM GIEVVMITGD 660
  661 NKRTAEAIAK HVGIDRVLAE VLPQDKANEV KKLQTEGKKV AMVGDGINDA PALAQADIGI 720
  721 AIGSGTDVAM ESADIVLMRS DLMDVPTAIH LSKSTIRNIK QNLFWAFGYN TLGIPVAMGV 780
  781 LYIFGGPLLN PMFAAAAMSF SSVSVLLNAL RLKGFKPVR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle