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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|89897458, gi|...
Protein type: Transmembrane
Type Confidence: 0.53
Topology Confidence: 0.49
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMMQLKHPFQ SGFQQQSCKR HTKKVVVDME SKAGKGSNLS RRSFLKFAGG AGIAGASLSL  60
   61 TGCGQPLTPA SAVGGEGWMP TQYNEPGGWP TNVRGRVPID PENPALRRDD QKCILCGQCI 120
  121 EVCKTIQSVY GNYELPLKNE IPCINCGQCI HWCPSGAISE REDIDQVAKA LADPKITVVV 180
  181 QTAPATRIGL GEEFGLPVGT NVQGKQVAAL RKLGFDVIFD TNFAADLTIM EEGTELVKRI 240
  241 TGELHHPLPQ FTSCCPGWVK FVEYYYPELL PNLSSAKSPQ QMAGALVKTY FAEKNHVEPQ 300
  301 KIFSVAIMPC TAKKFECQRP EMISAQTYWQ DEQVSPDVDV VLTTRELARM IKRAGIDLPS 360
  361 LPDEEYDQLM GVATGAGAIF GTTGGVMEAA VRSAYYLVTG EQPPAALWQL TPVRGMEGVK 420
  421 EAAVSIPGAG EIRIAVISGL DNARAIMEQV KAGNSPWTFI EVMACPGGCQ YGGGQPRSSA 480
  481 PPSDGVRNTR AASLYKIDAQ AKLRNSHDNP QIKQVYAEFL TAPLSEKAEE LLHTHYISRA 540
  541 EEFDAKKPQS HEYEV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle