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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|91079240
Protein type: Transmembrane
Type Confidence: 0.96
Topology Confidence: 0.57
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLVLKKSAEA HVGSLGVCLK QNLGDYIRHP VLYELSHKYG LPTENISDSQ LSGKLEELKE  60
   61 IIRREIRKEL KIKEGAEKLR GVSTDRRSLN HVATIVKNSN WKLAELKNEL SELESQIILS 120
  121 QGHTTPSTPS SNGGKISLTK CLEKNGTYTV SVFKNALPRS PLEGHNDKVN ASQYTRIENL 180
  181 ERQLNIELKV KQGAENMIHS IRDKKLLSEA QQMLQDSRKK IEYLKMTITK MKHDIDSKQR 240
  241 GSMHDLTANG DVSHREFEPP VDERVEDLKH RLRVEAAVVE GAKNVIKLFQ NGSKDKSDKK 300
  301 ALSEAQDSLR ASSMKLDLLR KSLEMRRAEL PADSPVAMQL KEELANAQTF SPLSVHYTSL 360
  361 QPFRERSNGN KMLTSSSTIN RCAAVTGTLE VRLMGCQDLL EDVPGRPRKE ADGSSSPMDL 420
  421 RFFKKGVTGR GSSKSYSIKD EVSDEIMAVL KLDNTTVAQT SWKPCSQQAW DQRFSIELDK 480
  481 HRELEIGVYW RDWRSLCAVK FLKLEEFIDD DRHGMALHLE PQGLLFAEIK FLNPMISKQP 540
  541 KLQRQKRIFK QVMPRAKQMN INIVTWGRWM KQSSRIPNRN NTIVQSTEML PEEPEDKPET 600
  601 PGETPDPQAF GLGGQRPLGL GVAVLPETPP PVPTAPPPIA KKRMCVTPPP VPPRLDPESA 660
  661 AALKEFDFLE EQEMSRTGPL LIPSTPSPVV IPEQLVPPSP QPVIEFPDDE PPLEAVNVAR 720
  721 RPVARELGYR DSAYESRRHS QYTGMSIDNF KLISVLGRGH FGKVILSQYR NTGEYFAIKA 780
  781 LKKGDIIARD EVESLLSEKR IFEVANSIRH PFLVNLFACF QTEAHVCFVM EYAAGGDLMM 840
  841 HIHADVFSEP RAVFYAACVV LGLQYLHENK IIYRDLKLDN LLLDTEGYVK IADFGLCKEG 900
  901 MGFGDRTGTF CGTPEFLAPE VLTETSYTRA VDWWGLGVLI FEMLVGESPF PGDDEEEVFD 960
  961 SIVNDEVRYP RFLSLESIAI MRRLLRKIPD RRLGSSERDA EDVKKQAFFR HIQWDELLHR1020
 1021 RVPPPFVPTV HSMEDVSNFD EEFTSEKPHL TPPKEPRPLT EQDQYLFRDF TYIADWTRLT1080
 1081 CGTPRGAGGI PMSSNFPNKL LSRVILRSPS YTWIETPGWL SAKVENISSN NGGCAGTDTC1140
 1141 ECFTGIVVFL CINTAMTPPA VSIPNDKGVT SRRRISRTAS ELSPDRMAAC TAAPYATASS1200
 1201 GLIDLLSSLP WNRLWRSDWI FGIRVEPPTS TMMVERHFRD ISSHPRISKR NADLFVEAVG1260
 1261 DGGRRGLVDD PQDIQARYGP GILCGLPLGV VEVRGDGDNR PRDMRSEIGL RRLLHFAKDH1320
 1321 GGDLFREESL RFALVPDPNF RLPVIVNHLE GPQFHVVLDG RPESCHFSAD IVHPIAQTSL1380
 1381 ATQQPFGDFI VLSATVNSTM DILPSVGIFR ELQDIHDTGY FSAQPSLDDH WQQTCYEMER1440
 1441 YLKDEPKMQS FKKLPSDMER TLYGVNCIED YSDRHLDAFS SASSPCSWDE GALSCAVLVK1500
 1501 QEPLDDEEDE DDAFEGRVHA DAGDALQLRL VARNPATLTP PSSPESGPGH SNGSSSASEL1560
 1561 DVCGLRVGSV SRNAIVRVRG LARYISVVPR TTQSPVSSPA STTTVKHRLD HSPDSKRRIH1620
 1621 KCQFLGCKKV YTKSSHLKAH QRTHTGEKPY KCSWEGCEWR FARSDELTRH YRKHTGAKPF1680
 1681 KCRHCDRCFS RSDHLALHMK RHIPFSLVFA LSSNLKRLLN GYDSCGNTCG VENKPLYYRN1740
 1741 CSELNMRDKP IAMMKYYDVD PLCIFSLQKV LPDKCVEKCE PPNQLIFNRC YPPEADTNLD1800
 1801 SKSRNFKQMI EIPHVFLSNI ATITAMSFTG LSEKFARKNL NQSEFPVLSF GLFACLRCHV1860
 1861 AATFWTLTLF QSFVALAAAA LFWHKYINSG STMYLFLALG AMAYFTSVFI YFFVLYNTFT1920
 1921 MVRRVYHQAL NAIFRAPMIL VQPLLTITVL ISVITTMIFL MLLSLSPSGW PEISDEGPLV1980
 1981 YEFATNEATL YYLIYLAFLG FWIYSFGEGF QAMVVSGATV EIYTTKDKTS LRHPVRKSYH2040
 2041 TLLHHHLGTV ACGSLLATIF AFMRGLAVYV IRKVYILTSM KGQPFCKSLK RAVELLRLNL2100
 2101 VETIALTGFN YLIIYGFSLL IVVITDSKFT FYVRLGILFG AVSASLVAHF VLKVLHATLV2160
 2161 LEVLAVIAFF LFGFSQSVKV PQNSSFPVER TFYVVFMLFM GYWIFTFSVG CQNMMTAGVV2220
 2221 ASYYFSRDKN SLENQYLKFA KIVVRYHLGT VAAGSLTITL VSILKFVINR FRARDSEWCN2280
 2281 EVLYLLCHCM EEFLHYVSVK AYIMTAIHGR SFLKSGKRAV RVMWLHFLDL VQVDAFNVLA2340
 2341 MFSAGVIITL VCLFIAYAVV AEEHETFILA NLIIVLGLAA VTLYLFLSMI SVSIGTLFLC2400
 2401 YCEDRHMNDD TDQPYYMSPQ LEEAVSEALE FAIRTRYWFA RNLDEKKLIY IGIVSSCAIF2460
 2461 LQSIFICYFH DRYSLIIKMF REATQFVAIL AVVTASIVFL GALISTNQYL SEIPDHPSVY2520
 2521 EYRDTRLAEG ALACIVVFGI WTFALANGCQ CMIVSGAIST YYFTRCTHLA AMTMQQYCLR2580
 2581 WNNHQPNFIS VFSSLLNSES LVDVTLAAEG RHLQAHKVVL SACSSYFQSL FTINPCQHPI2640
 2641 VILKDVKFTD LKVMVDFMYY GEVNVSQEQL PHILKTAEML KIKGLAEIPV DQSVSKAQNS2700
 2701 STDKAELLTP SEANWSTEGG PRQSLSPSPC PLSPSSKRKR LRKSSTGSGS GSTERTSDEH2760
 2761 QSSEVTLTSS SGGTVIKSDP GGYASDSSSI LQKSKGHSSD SELHRGSSHE SVEGEITHQV2820
 2821 TLQVPQEVSV QHGLEASSVE AAGPSTTSQL TLTGMQWNVM DHTAYAQFTS CTSPTSITTN2880
 2881 QTYAPPCPPM AQPMNPPSPN TQCYQNQITN SPPQMIQKRK RSINPQGDEN FIRALEAVRF2940
 2941 GGIGFCKAAR LYGVNNRTLW LEYKKRGYPN FRLSIKNRKQ ENAQAAVESN QQTPQSPQTE3000
 3001 VQQVEKQEEQ SHPVALISGA FFDGKHVDLG TVLQRPKYLD ATLTLIFKQE FIVLEKSSGS3060
 3061 QRAQQLVMGT KRGRFLMRQP RIKRESDPSQ PSDSEPLSPQ YLSVPVRVER QCSEPLPSHS3120
 3121 PPPGNLLTVP GPVLVKQHSH PLLPSQTQAK SMSPPLHIQI VPHESAQRAV SPVVVVSDPL3180
 3181 AVSPHEGPLR ADSAATAPTS SLRVRADELK RSASSPQTGT RSSHCPVVRT GPALGCNYCW3240
 3241 NTVDTHGRIL RRKTKYHCPE CQTNLCIVPC FQEYHERHVS AGQTDPIALT TSTVPKTLDP3300
 3301 FEPLVGVLKC HIGDFPGHDV DFGSPQAFRI SDGFLNAVFK FLFFAGNCRK TEFALRYIAG3360
 3361 VRVNEDLLDV SAVFCINDLL FRETKRKAGL NGPKTGLFGQ ATRVPTMEPK TFFWYFKPIA3420
 3421 LICKAVGIFP LQNLGAKHPK ELRGPFLSFA QLYSFGVFAF NIYMIWYFSG FMFTTQNSFY3480
 3481 LFSVVYVMIF RSIFCFVFCA RHSKKLPKLI QLLDLFDRKK RPILVDPKSS YCFCYFFTWT3540
 3541 ILPIVIGFVT IAFSFYESMN VVLETMPPEM SVLQTKLSAC FFGCLATWQV LPLLLYIYFA3600
 3601 FRITYDYRIL NKTMKTQCHG CCFLSEEIKY SSDFNETLEY VRQMHNLLTK AVEEMGKCYG3660
 3661 NFMAIDQLCL IVMVIANICT FISNNGTHEI HLLAITFFNL WVVVWVLVIS NEIKEAGNKV3720
 3721 IYVLRAIVLS GVDERARIEI QTFMMQLVAQ PVEVSAAGYF IIDKRQIPSL SRGKYPGGYR3780
 3781 KLWYWSHRIL LCLGGVGIIL ALNNFSKLQF TISNKLPNRE IDVPIEHDNV LIFDNFRTVI3840
 3841 DFDSVRGQVA TQGRLQIVLG GNLIVYQFDT PEGNQGKTMP LSLLSGHFQG SLQHMVGKGY3900
 3901 GKVGIIALCN THKTVRGIVT VTGDGQSSRL ADFSVEEANL PMAFPDQNVT FNFLKQGSVS3960
 3961 VQTAHDNASF LIGSDKFGTF CYAKLEEGFD RSLAYVILWI IYQFEDFLET FLDIWQKGIP4020
 4021 GKSVKIWGFS AVMTYPVLMQ ISLRIFDRIA TMSRIGATGR CSIDIFLFFF IVVRKVGINV4080
 4081 QIFLFLVFIM CDNALTTLYA TLAAEPRVLK AILFSFKDQP FGSSATNKRS IRVEGFQCVK4140
 4141 KSIKTGRFRF IFFHLGENLA QVLEKYREEF GRASESPGGG VSWLSPSGLM GALRYELEMA4200
 4201 VSGYGGSRAE AEPQSRSHCY LRRRGVVGAS GVLLGLDEGL GVVAGGLIHH SGHVVREKVS4260
 4261 RVVLGLHRLA LPTEAARAPP EGALLEHELA RWVDGPVVAL ARAPQALWRT WRDPGVPKPR4320
 4321 QLTAGRRTAV ENHIPVAGLR GRFRAVPGAV PRRGLVPDVL LRSGTGAVVH PSGGVQAPGV4380
 4381 AVGVLLPRRH QRVDGEGRRR VHRHGLADDV LLVHDDRLDV VVLALGELRG LALGLALELF4440
 4441 RLLQRFFVAL GGDVGVELLA LDGFLLLAEG VLLLEAPPAA QVRAVVEHVV GVWVKGPVAP4500
 4501 FSRLFVVPWD FDETFVQAEM PLRVIFLSGA FWMAMAMSAM KKPEILNIAD NGLTQKRVKT4560
 4561 HVRLDQINSK LIKGVSREYS AVCSLIHRSG LQNLSHLPYY LDKREFHSSV KNLQQSSGGK4620
 4621 PGGDKNKPND DDDKDKISSL LAKAFLWMLT AYMVIAIISL MFPSSSQPEV VRYVSWNEFL4680
 4681 YQMLAKGEVE EIIVRPDIEI VTIILHEGAI IKGKKVDNRT YHMNVVDINK FEDKLREAER4740
 4741 RLGIQDGIPI TFERGTDTAG KLLISLLIVA ILISLLARSK SIRPPISMDT FTQLGRAKFT4800
 4801 LVDPLSGQGK GVHFSDVAGL REAKQEVMEF VDYLKRPEIY KSLGAKVPKG ALLLGPPGCG4860
 4861 KTLLAKAVAT EANVPFLSMN GSEFIEMIGG LGAARVRDLF KEARKRAPCI IYIDEIDAVG4920
 4921 RKRSGQLGQG GASGESEQTL NQLLVEMDGM ASKESVVMLA STNRADILDR ALLRPGRFDR4980
 4981 HILIDLPDLE ERKQIFELHL KSIALENEPE FYSKRLAHLT PGFSGADIAN VCNEAALHAA5040
 5041 REKQKHVTRD NLEYAVERLV GGTEKRNHAM SPEEKRIVAY HESGHALVGW MLEHTDALLK5100
 5101 VTIVPRTNLA LGFAQYIPRD QKLYTKEELF ERMCMTLGGR VAESLIFNRI TTGAQNDLEK5160
 5161 VTKMAYAQIK EFGMSESVGL LSFPQEETQE KGRRPYSKKL ANLIDIEARR LVSRAYKRTE5220
 5221 EVLLKNKEKL ELLAETLLKK ETLNYDDVEK LLGPPPFGAK HLIEPAEFEE SVRKDAGDTR5280
 5281 PTETKLNMWK VALFSTLVTA FFFIHQARTC NEAVCGSIVS KCLLTQSCKC DFSFENCTCC5340
 5341 KDCFNCLSYL YAECCSCVDM CPKPNDTEGA LSKKSNVEDF SEPVPGLFNV LTEYPDSERR5400
 5401 WNSTTFPIDI DTSQYGPKKE IKIHMQSAEQ EVAPIKTNVI TLNCTVAFMS KCMSLTKCRS5460
 5461 SCQTMGASSY RWFHDGCCEC VGQHCINYGI NESRCRECPL KDENELSEEE FDVDDYDYAN5520
 5521 TAPEIEGFYL WEAGPGYILR CIRSSWVSAQ GGMKGPPGRE WPGREVWGME ERVGRQESNW5580
 5581 IASARPSPLV MSPSIPGVVL LLLSWEALVG TTNLVGKYLC CQGPASARPQ SHGMDHRLIV5640
 5641 PSPLSPTTSA AAASDHLLCP LSGNSGKCNG DLDPLPGNGD FIVKSCPGLG NGPLIVSRGP5700
 5701 ALGLPSVEKW GLEVWERDSC IERRAKHCCR AAMLQSGSWM PPGVAWHEGH IAMEPKHSHP5760
 5761 AMENWHSVAA TLRALGLSGW LGGSSGGFFS FESLSDGSAG PEAPWISLNY NDPRRDSWLF5820
 5821 LGTDPNQLCL QHRLPPLEFR IKKRRCSCAH AVHQVPVMAP AVIARFLERP SAANPELVAR5880
 5881 KISLINTYCS RKPGAERVPL QVSAAVSDPD LQVLEGLVAA AAPGGHPHHL HGVGLEEVDV5940
 5941 PPGAGLLLGL GAAFSVVFGA FFAVVGVQGA APANDVLGEK WANAGCGGPG RPHAPAFGLS6000
 6001 GSPPPPPPPP PPAPLTPTPL TFTLAPLNFT PRGVTDTGDS DDRRDARKYS DVTTINMQHT6060
 6061 SGSPQQFCLR WNNYQSNLTN VFDQLLQSES FVDVTLACDG HSVKAHKMVL SACSPYFQSL6120
 6121 FFENPCQHPI VIMRDIKWPE LKAAVEFMYK GEINVSQEQI GPLLKVAESL KIRGLADVNG6180
 6181 EQDIVAPTGE LTTSTRTLLK TASTPNNGSG EWECRPEGDG PPRVKKRRRP SGERSSLSSP6240
 6241 AESASTEIPD PPPSVEMSPA PSATPLPSSV SNEPLPLTLP LPQQPQVSHA SSDDMEIKPG6300
 6301 IAEMIREEER VRHLLRVSLG LGWKRGFYGD KFPPLYSNNY PTLLKLKTPT WTQEQLKEAI6360
 6361 DAVVKQKMRF TQASARYGIP KGTLYDNILG KSKRMAVLEE AGLTPSEEAA VLEFCCDVSV6420
 6421 SPYNRRTKKS LQSVLNFVEK LRRARDPEFI FTGLSGFRWW WAFCKKHNIV SLYYENNDSY6480
 6481 QYQLQSMWQK CWNTNQSLVH NLRFRERGPL KSWRPETMAE AIFSVLKEGL SLSQAARKYD6540
 6541 IPYPTFVLYA NRVHNMLGPS ADGGSDLRPK GRGRPQRILL GVWPDEHIRG VIRAVVFRDS6600
 6601 HQIKDEPHVA YPRIHDGVSI HSYPNNSCSN GSEANVSPGA AAAAAVAAVA QGLRQQMCSM6660
 6661 VAAAQHQSSA HDTNPVASLV NSLALAGHCG NVSMSSNGAA APMGPLRSMS SPAGSIQDLR6720
 6721 ISPAESALES PISSPLGLTV SSSLEPAINL NIGNSMDVGM GMTYKPTRAF ASPRPENLFQ6780
 6781 EDIDELVKPM STPRPKDAMA TIKMEPMAES KELPSTEEDL GFLSELLQSK ELHALVNVHN6840
 6841 KIISNGASDK FFPMLSTSMH VMVDVLEVLA AKLQVSEECK ELFYLLQKPH VQGLLYSHDA6900
 6901 IAQKDYYPHL PEIPQEADED EETIKIVQLV KSNEPLGATI KTDEETGKII IARVMHGGAA6960
 6961 DRSGLIHVGD EVVEVNYINV EGKTPNDVLS ILQNSEGTIT FKLVPADSKM NVRESKVRVR7020
 7021 AHFDYEASND PYIPCKEAGL DFRKGDVLHI VSQDDAYWWQ ARREGDRNMR AGLIPSRALQ7080
 7081 ERRIIHDRTQ AAKDGDDALP VLTCSQSPKS PRCASKPKTK KIMYDTAEND DFDREQIATY7140
 7141 EEVAKLYPRP GIYRPIVLIG APGVGRNELK RRLIDTDPDK YRTPTPFTSR QMKPGEVNGK7200
 7201 EYFFVPREKM EEDIEASKFI EFGEYKGNLY GTSADSVKAI VNSGHVCILN PHYQALKMLR7260
 7261 TPQLKPYIIY IKPPPLERLK ETRNAVHARS TFDVNNSRGF TEEEFNDIIK SATRIEFLYE7320
 7321 HFFDEVIVND DLAVAFSQLL AAVNRVESEP LWVPASWVQ

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