YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|91080949
Protein type:	Globular with Signal Peptide
Type Confidence:	0.72
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCQKCQIGIL VFCLISGGIA LENGLARTPP MGWLAWERFR CNTDCKNDPE NCISENLFRT  60
   61 MADIVISEGY AAAGYEYINV DDCWLEKERD RFGQLVPDRQ RFPRGMKALA DYVHSKGLKF 120
  121 GIYEDFGNYT CAGYPGVLGY LRTDAETFAS WDVDYVKLDG CYAHPSEMDR GYPEFGFYLN 180
  181 QTGRAMMYSC SWPVYQIYAG MQPNFTSIIE HCNLWRNFDD IQDSWASVES IIDYYGNNQD 240
  241 VIVANAGPGH WNDPDMLIIG NFGLSYEQSK TQMAIWAILA APLLMSVDLR SIRPEYKAIL 300
  301 QNKKIIAVDQ DPLGIQGRRI YKHKGIEIWS RPITPLYQNY FSYAIAFLNR RTDGTPSDVA 360
  361 VTLKELGLTS PTGYRVEDLY EDVDYGVLSS QTKIKVKVNP SGVVILRADV QNDFKRRIPY 420
  421 YTTQRTIYNP LSQVFRIRNN GF

Type	Start	End	Confidence
Signal Peptide	1	20	0.88
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	442	0.92