YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|91085249
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.56
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSIKADFKQL LKPYYLFNIV LSLSYVILKR TPGLCNYLFH VEECEFDGRE TEILFFLIIV  60
   61 IMIRTRKSGS VSMINYLSSS FVYTKIANLI LWFNADFLMG IIYGIIFILG ALLFPEPTYS 120
  121 GPDNVIYFRG MQGLDEELAR SRDGYWLVTF YTVWNPACVN FAPVFAKLST EYHLENFKFG 180
  181 KIDVGRYPDA AQKYRVNDSS LSKQLPTTIL FKEGKEVVRR PAIDSKGNIL KFFFSSENVK 240
  241 GAFDLNNLYE ECKSALKNNK NKHVKND

Type	Start	End	Confidence
Cytoplasmic	1	88	0.57
Transmembrane Helix	89	114	0.82
Non-Cytoplasmic	115	267	0.56