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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|91089939
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.98
Topology Confidence: 0.82
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTKKSAELRR SVAAVAVAAA VTLLPTHCEE FHIPSKSKNR LFAHGRLGGR HPEPYYGRLI  60
   61 GPLQEFAHGI KGTVYAVDES TIFIKGFSYD GTGPDAFFWI GNSPRPSPEG IIIPYPENYA 120
  121 GREPPVLRAY NNTNIILRLP MGKRIRDIRW LSVWCRRFTV DFGEVFIPPN LEVPKPRVLP 180
  181 EFKRLAHGLR SDNISILDAK TFYIPNLHYD GAGPDAYFWV GNGSEPSPFG IKVPNEMGSL 240
  241 DPLRGYQGED IEIQLPGSIT VYDIDWLAVW CVQYRHNFGH VIIPKDLDVP PALGQTKIST 300
  301 STSKPSSPAN CQEFLDKRLQ VRWEMRGDYV QITLAAKIRE DQYVAFGLSG APTKSQMVGG 360
  361 DVTVAFYDTN SRTFKAVDYY MSTTAQCDGK SGVCPDERIG GRNDVTLVSG DRKNGITTIT 420
  421 YMRPLQTNEA VNDRPIPSQG NISVIAAFGP LNSRKEANAH SIRDKTEGDY MIDFSDVDHN 480
  481 MCSGDLDELD DEDEIKPWPP AKITGESTFT AKIGPTGGKR GYTAITGQPS WGIAWYINDL 540
  541 LIPEITVERG QTYTFIVEGG SDSSNPARYH PFYITDSVEG GFGQKSEEEK RQQKVYAGVE 600
  601 YDREGYPYPT ASGRYCELAH KSIDKSAESE TFEEYLDTLR LECDQGEPGY LNWTVPMDAP 660
  661 DLLYYQCYTH NNLGWKIHVV NPGASQSNGE APSRSVSIIA LAAICLLTVS AITIHSRGRI 720
  721 F

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle