YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ATPF_VITVI
Protein type:	Transmembrane
Type Confidence:	0.71
Topology Confidence:	0.61
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKNVTDSFVS LGHWPSAGGF GFNTDILATN PINLSVVLGV LIFFGKGVLS DLLDNRKQRI  60
   61 LNTIRNSEEL REGAIEQLEK ARARLRKVEM EADQYRVNGY SEIEREKLNL INSTYNTLEQ 120
  121 LENYKNETIH FEQQRAINQV RQRVLQQALQ GALGTINSCL NKELHLRTIS ANIGMFGSMK 180
  181 EIRNN

Type	Start	End	Confidence
Non-Cytoplasmic	1	26	0.79
Transmembrane Helix	27	49	0.61
Cytoplasmic	50	185	0.61