YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|226898835, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.61
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLGNPLLCRA FAFRHSSVYA SASDYQNNEF HGRSEAMEKK IGFIGCGNMG KAILGGLIAS  60
   61 GQVLPGQIWV YTPSPDKVTV LHDQFGINAA ESAQEVAQIA DIIFAAVKPG IMIKVLSEIT 120
  121 SSLNKDSLVV SIAAGITLDQ LARALGHDRK IIRAMPNTPA LVNAGMTSVT PNALVTPEDT 180
  181 ADVLNIFRCF GEAEVIAEPM IHPVVGVSGS SPAYVFMFIE AMADAAVLGG MPRAQAYKFA 240
  241 AQAVMGSAKM VLETGEHPGT LKDMVCSPGG TTIEAVRVLE EKGFRAAVIE AMTKCMEKSE 300
  301 KLSKS

Type	Start	End	Confidence
Signal Peptide	1	20	0.64
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	305	0.94