YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|226898761, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.81
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHPSDQWQIC VILNSLWLAA AALLLESYMS QALKNLLTLL NLEKIEEGLF RGQSEDLGLR  60
   61 QVFGGQVVGQ ALYAAKETVP DERLVHSFHS YFLRPGDSKK PIIYDVETLR DGNSFSARRV 120
  121 SAIQNGKPIF YMTASFQAPE AGFEHQKTMP SAPAPDGLPS ETQIAQSLAH LLPPVLKDKF 180
  181 ICDRPLEVRP VEFHNPLKGH VAEPHRQVWI RANGSVPDDL RVHQYLLGYA SDLNFLPVAL 240
  241 QPHGIGFLEP GIQIATIDHS MWFHRPFNLN EWLLYSVEST SASSARGFVR GEFYTQDGVL 300
  301 VASTVQEGVM RNHN

Type	Start	End	Confidence
Signal Peptide	1	32	0.77
N-region	1	23
H-region	24	29
C-region	30	32
Cleavage Site	32	33
Non-Cytoplasmic	33	314	0.98