YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|237707528, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.67
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVVSFIAFSK NSTHFKGIFA MRIILLGAPG AGKGTQAQFI MEKYGIPQIS TGDMLRAAVK  60
   61 SGSELGKQAK DIMDAGKLVT DELVIALVKE RIAQEDCRYG FLLDGFPRTI PQADAMKEAG 120
  121 INVDYVLEFD VPDELIVDRI VGRRVHAPSG RVYHVKFNPP KVEGKDDVTG EELTTRKDDQ 180
  181 EETVRKRLVE YHQMTAPLIG YYSKEAEAGN TKYAKVDGTK PVAEVRAALE KILG

Type	Start	End	Confidence
Signal Peptide	1	37	0.65
N-region	1	28
H-region	29	34
C-region	35	37
Cleavage Site	37	38
Non-Cytoplasmic	38	234	0.98