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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|237707335, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.58
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMNNEPLRPD PDRLLEQAAA PHRGKLKVFF GACAGVGKTW AMLAEAQRLR AQGLDIVVGV  60
   61 VETHGRKDTA AMLKGLAVLP LKRQAYRGRH ISEFDLDAAL ARRPALILMD ELAHSNAPGS 120
  121 RHPKRWQDIE ELLEAGIDVF TTVNVQHLES LNDVVSGVTG IQVRETVPDP FFDAADDVVL 180
  181 VDLPPDDLRQ RLKEGKVYIA GQAERAIEHF FRKGNLIALR ELALRRTADR VDEQMRAWRG 240
  241 HPGEEKVWHT RDAILLCIGH NTGSEKLVRA AARLASRLGS VWHAVYVETP ALHRLPEKKR 300
  301 RAILSALRLA QELGAETATL SDPAEEKAVV RYAREHNLGK IILGRPASRR WWRRETFADR 360
  361 LARIAPDLDQ VLVALDEPPA RTINNAPDSR SFKDKWRVQI QGCVVAAALC AVITLIAMQW 420
  421 LIAFDAANLV MLYLPGVVVV ALFYGRWPSV VATVINVVSF DLFFIAPRGT LAVSDVQYLL 480
  481 TFAVMLTVGL VIGNLTAGVR YQARVARYRE QRTRHLYEMS KALAVGRSSQ DIAATSEQFI 540
  541 ASTFHARSQV LLPDDNGKLQ PLTHPQGMTP WDDAIAQWSF DKGLPAGAGT DTLPGVPYQI 600
  601 LPLKSGEKTY GLVVVEPGNL RQLMIPEQQR LLETFTLLVA NALERLTLTA SEEQARMASE 660
  661 REQIRNALLA ALSHDLRTPL TVLFGQAEIL TLDLASEGSP HARQASEIRQ HVLNTTRLVN 720
  721 NLLDMARIQS GGFNLKKEWL TLEEVVGSAL QMLEPGLSSP INLSLPEPLT LIHVDGPLFE 780
  781 RVLINLLENA VKYAGAQAEI GINAHVEGEN LQLDVWDNGP GLPPGQEQTI FDKFARGNKE 840
  841 SAVPGVGLGL AICRAIVDVH GGTITAFNRP EGGACFRVTL PQQTAPELEE FHEDM

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle