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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|92869887
Protein type: Globular with Signal Peptide
Type Confidence: 0.97
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKYQITLIE KMSCILTTCF LLSIVLSTHA EFVKKTYIIH MDQSAKPDIF SSHQEWYSSK  60
   61 VKSVLSKSVE AEIDSSEEER IIYSYNTAFH GMAAKLSTEE AKKLESEAGV VAIFPDTKYQ 120
  121 LHTTRSPYFL GLEPIQNTNR SWSEKLANHD VIVGVLDTGI WPESESFIDT GLKPVPSHWK 180
  181 GACETGRGFR KHHCNKKIVG ARIFYHGYEA ATGRIDEQAD YKSPRDQDGH GTHTAATVAG 240
  241 SPVHGANLLG YAYGTARGMA PGARIAAYKV CWTGGCFSSD ILSAVDTAVA DGVDVLSISL 300
  301 GGGVSSYSHD SLSVASFGAM ERGVFVSCSA GNSGPDPVSL TNVSPWITTV GASTMDRDFP 360
  361 ADVSLGNGRK FSGASIYKGK SVLSVRKQYP LVYMGSNSSS PDPRSLCLEG TLDSRTVTGK 420
  421 IVICDRGISP RVQKGQVVKN AGGVGMILTN TAANGEELVA DCHLLPAVAV GEKEGKDIKQ 480
  481 YVLTTKKATA TLAFHNTRLG IRPSPIVAAF SSRGPSLLTL EILKPDIVAP GVNILAAWSG 540
  541 LTGPSSLPID HRRVKFNILS GTSMSCPHVS GIAAMIKAKH PEWSPAAIKS AIMTTAYVHD 600
  601 NTIKPLRDAS SAEFSTPYDH GAGHINPRKA LDPGLLYDIE PQDYFEFLCT KKLSPSELVV 660
  661 FSKNSNRNCK HTLASASDLN YPAISVVIPA KPTNFASTIH RTVTNVGPAV SKYHVIVTPF 720
  721 KGAVVKVEPD TLNFTRKYQK LSYKISFKVT SRQSEPEFGG LVWKDRLHKV RSPIVITYMP 780
  781 PM

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle