YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|238508469, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.54
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVNWLSLAVP FAYLGVLIGS LATFSSLYRK RKAQKAYSLE PWFPAHLQRD IYFSLLHIDP  60
   61 PATSSKEKKA PAVPESVLKA ALLRRAEEDI KRVLALRSQK QALGVLLQRG SVGDDLWQRF 120
  121 QRAEKEMEDE VRDVVSEANA YVPGWGQTIF QSANEMMNNT LYRERIAEQQ AKLDEERQWW 180
  181 EKRRASIKEG FMKELDAEDS TSTAPPQKTE APADTTPTTT SSSTPAIKTP ESSGAPSSVT 240
  241 GSDDDAVLVE ADEQPGSPAS PSKKKKKGKK

Type	Start	End	Confidence
Signal Peptide	1	22	0.54
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	270	0.57