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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|169771137
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.64
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFSHSIQFN AVPEWSSYYL AYSNLKKLIY SLEQQVRKAG GQAQADVESA PLLDSTPNTD  60
   61 SIFRKALDAE LEKICTFYQD KELEILKEVE DVIRDAEEYA SEADGINVDP MSEHMTKTRT 120
  121 MSSGSRRRSG NGYHDFPLNP DRRRSSVTES AVDDDDDDAD SDDEHLSVHS GRRLSHGAGS 180
  181 TNPDDGRTDY MGESGYMGDS RGWRSNRAQV EHFGDPKVLD LYNSGLSLKK RAVDAYVSLC 240
  241 GLKSYIQLNK TGFSKALKKY DKILDRSLRR EYMNSTVSLA YPFTESTMSK VEADIRKIEK 300
  301 VYADVVTTGD LSLARRELRL HLREHVVWER NTVWREMIGI ERKAQAANVG IRRTILGGDE 360
  361 DPAAARRQGD EQEISLTEFK TPLGVFHPPQ WLCSLSFGTL VLVLAIFVTL LAVPIMDKPE 420
  421 QQNCLAMLIF VSLLWATEVI PLFVTSLLIP FLVVLLRIMK SEEKPYKRLG PKEATSAAFS 480
  481 AMWTPVIMLL LGGFTIAAAL SKYDIARRMA MFVLSKAGSS PRVVLLTNMF VSMFLSMWIS 540
  541 NVASPVLCYS IIQPLLRNLP PDSNFAKALV LGIALAANVG GAASPIASPQ NIIALQNMHP 600
  601 SISWGTWFFV SLPVCIISIL LIWGLLVFTF HPGRGTTLVP IRPVKDKFSG VQWFISIVTL 660
  661 STIALWCGSH QLEHVFGDMG VIAIIPMVLF FGTGILNKED FNNFLWTIII LAAGGLCLGK 720
  721 AVTSSGLLHT IANGITARVE HLSLYGVLIV FSVLILIMAT FISHTVAALI ILPLVRQIGV 780
  781 GMEDPHPNLL VMASALMCSV AMALPTSGFP NMTAIMTEVP QTGQRYLQVH HFFTRGIPAS 840
  841 LMAWAVIITL GYALMYIAGL 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle