YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|113611755, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.55
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SCLTSCCLLP PSSSSSSSSS RNTGVWGESD QVAAGCFFFF FFSSSSSLAM ALLLLRMGVS  60
   61 VALLVAFFSS LIPSSEAYDP LDPNGNITIK WDVLQWTPDG YVAVVSLYNY QQYRHIQSPG 120
  121 WKLGWVWAKK EIIWAMNGGQ ATEQGDCSKF KSNIPHCCKK DPEIVDLLPG TPYNMQIANC 180
  181 CKGGVLNSWA QDPANAIASF QVSVGQAGTT NKTVRVPRNF TLKSPGPGYT CGSAKVVRPT 240
  241 KFFSQDGRRT TQAHMTWNVT CTYSQIVAQR SPTCCVSLSS FYNDTIVNCP TCSCGCQNNK 300
  301 PGSCVEGNSP YLASVVNTHN KDSLTPLVQC TSHMCPIRVH WHVKVNYKEY WRVKITVTNF 360
  361 NYRMNYSQWN LVTQHPSFDN LTTIFSFNYK SLNPYGVIND TAMLWGIKYY NDLLMTAGPD 420
  421 GNVQSELLFK KDPKSFTFEK GWAFPRRVYF NGDNCVMPPP DAYPWLPNAS TRVMSSILLP 480
  481 FITIWTALTF LMVYA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle