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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|94396095, gi|...
Protein type: Transmembrane
Type Confidence: 0.86
Topology Confidence: 0.79
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAYYIMIPCQ VGKRGHRLWT WTRVAARINV ALCFVGGESA WFLLVSRLTS ASGGKGLSVK  60
   61 PSPQPTAQAE DEEKNRRTVT VNAAHMGKAF KVMNELRSKR LLCDVMIVAE DVEVEAHRVV 120
  121 LAACSPYFCA MFTGDMSESK AKKIEIKDVD GQTLSKLIDY IYTAEIEVTE ENVQVLLPAA 180
  181 SLLQLMDVRQ NCCDFLQSQL HPTNCLGIRA FADVHTCTDL LQQANAYAEQ HFPEVMLGEE 240
  241 FLSLSLDQVC SLISSDKLTV SSEEKVFEAV ISWINYEKET RLDHMAKLME HVRLPLLPRD 300
  301 YLVQTVEEEA LIKNNNTCKD FLIEAMKYHL LPLDQRLLIK NPRTKPRTPV SLPKVMIVVG 360
  361 GQAPKAIRSV ECYDFEEGRW DQIAELPSRR CRAGVVFMAG HVYAVGGFNG SLRVRTVDVY 420
  421 DGVKDQWTSI ASMQERRSTL GAAVLNDLLY AVGGFDGSTG LASVEAYSYK TNEWFFVAPM 480
  481 NTRRSSVGVG VVEGKLYAVG GYDGASRQCL STVEQYNPAT NEWIYVADMS TRRSGAGVGV 540
  541 LSGQLYATGG HDGPLVRKSV EVYDPGTNTW KQVADMNMCR RNAGVCAVNG LLYVVGGDDG 600
  601 SCNLASVEYY NPVTDKWTLL PTNMSTGRSY AVSCTSQNSM ANWLQTLNTC ARSGCSPLTG 660
  661 TLHQMKAETV MIEMWTASFQ GARYCILTSR IHLLGLGDSG PLRRPVEKMF DGEAVCTELH 720
  721 LLCFACTRAG RCLLWKYGIN GCRDKAVSKA LKQHGELDDV DEGVNGSMQK ARGEEEGWWR 780
  781 RMAGRMRK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle