YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|227892345, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.93
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKVRKAVIPA AGLGTRFLPA TKALAKEMFP IIDKPTIQYI VEEAKKSGIE DILVVTGKGK  60
   61 RPIEDHFDSV PELEQNLTEK GKTELLRLVQ QTTDINLYFI RQSHPRGLGD AVLMAKDFVG 120
  121 NEPFVVMLGD DLMEDKVPLT RQLIDRYEKT HASTLAVMKV PHEEVNKYGV IDPAAETQPG 180
  181 LFDVKQFVEK PDVDKAPSDL AIIGRYLLTP EIFDMLETQK PGAGNEIQLT DAIDRLNKIQ 240
  241 RVFAHEFKGQ RYDVGYKFGY LKTSIQFGLR HPEVRDELKE YIKELSKKIK

Type	Start	End	Confidence
Signal Peptide	1	25	0.90
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	290	0.99