YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|94731432, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.59
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMRSLWTAAT GMVAQQLNID VISNNLANTN TSGFKKSRAE FEDLMYQTMK IAGSATDGDN  60
   61 RIPVGIQVGM GVRPTAVHKF FTQGDFQNTG NPLDMAIEGE GFFQVLVGDQ LMYTRAGAFK 120
  121 LNQDGTLVTA NGYPLQPEFT VPPDAKSVAI SERGRITALD ANGQEIAAGE IPLYSFVNPA 180
  181 GLDAKGRNLY IPTEASGEAV EGVPGEENLG TIAQGFLEMS NVEVVDEMVQ MIVGQRAYEM 240
  241 NSKAIQTSDN MLQTAVQLKR S

Type	Start	End	Confidence
Signal Peptide	1	16	0.57
N-region	1	7
H-region	8	13
C-region	14	16
Cleavage Site	16	17
Non-Cytoplasmic	17	261	0.99