YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|94731686, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.95
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRLLLCIIT CVIVSSCSFA PDYNRPHLEL PEVWVSSPET GVPASMQWWK RFNDSTLDIL  60
   61 VAEALQHNRD LIAAVARVDY AQAQLGVARS DLFPHFSGNA QATPVWVDHK RVTDGQSPYS 120
  121 ANFSASWEID IWGKIRNAKD AAFSQLMATE AEKEGVFLSI AAQTANAYFL LRSLDLQCSI 180
  181 AERTVKTRED ALSIYTAQYQ KGFINKLDLT RAKTEVETAR TALYQKRIAQ ENAETALSVL 240
  241 LGRSPRLIMD TAIERGVSMK DLSCIPVIPQ GIPSELLERR PDIRQAEYTL KATSANIGVA 300
  301 RAAWLPSISL TGLFGIVSPH LSDLLKNPLK TWSYGETGTV PILDFGQVYY NVEAAQAKER 360
  361 EALANYEKTV QNAFKDIHDA LIRQYESKNI VNSLERMVKE LRIAVHLART LYDNGYTSYL 420
  421 DVLDAERALF QSELDLASAW SDRLSSIVQV CLALGGSWE

Type	Start	End	Confidence
Signal Peptide	1	20	0.95
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	459	0.98