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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|102139892
Protein type: Transmembrane
Type Confidence: 0.67
Topology Confidence: 0.58
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQPGGSSYRI DDHDERKERR SDIENSEDER RTRIGSLKKK AINASTRFRH SLRKKNRRKS  60
   61 DSRVISVSIE DIRNIEELEA VDAFRQSLIL DELLPAKHDD YHMMLRFLKA RKFDVEKAKH 120
  121 MWDEMLQWRK DYGTDTIIED FEYSELNEVL QYYPHGYHGV DKEGRPVYIE RLGKVDPSKL 180
  181 MQVTTMERYL RYHVKEFERS FLIKFPACSI AAKKHIDSST TILDVQGVSL KNFSKTAREL 240
  241 IQRLQKIDND NYPETLHRMF IVNAGSGFRL LWNTVKSFLD PKTTSKIHVL GARYQNKLFE 300
  301 IIEPSELPEF LGGCCTCAEQ GGCLRSEKGP WKDPNILKMV LNGEAQCARQ IVTVSNGEKK 360
  361 IIAYAKPQYP TIRGSDTSTA ESGSEAEDIT SPRPVRNHIS HPCLTPVHEE AKMVKAASFS 420
  421 SGFPESDEYV PMVDKAVDGG WKKEISNKRL YASKGQCSDP ETHKSPQGVR AQIIQFLVTI 480
  481 IVYLFTLVCS VSSCVSKRLH NEVFERDQHD PMFSVDPMVK EEYRHPSPAP AFTEADLLSR 540
  541 LLIRLGELEE KVNILQAKPS EMPSEKDELL NAAVCRVDAL EAELIATKKA LHEALMRQDE 600
  601 LLAYIDRQEE AKMRVS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle