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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|95109008, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.49
Topology Confidence: 0.13
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKNLILWLI IAAVLVTVMN NFSSPNEPQT LNYSDFIQQV KDGKVERVTV DGYIITGKRT  60
   61 DGDNFKTVRP AITDNGLIGD LVDNHVTVEG KQPEQQSIWT QLLVASFPIL VIIAVFMFFM 120
  121 RQMQGGAGGK GGPMSFGKSK ARLLSEDQVK TTLADVAGCD EAKEEVGELV EFLRDPGKFQ 180
  181 RLGGRIPRGV LMVGPPGTGK TLLAKAIAGE AKVPFFTISG SDFVEMFVGV GASRVRDMFE 240
  241 QAKKHAPCII FIDEIDAVGR HRGAGMGGGH DEREQTLNQL LVEMDGFEMN DGIIVIAATN 300
  301 RPDVLDPALL RPGRFDRQVV VGLPDIRGRE QILKVHMRKV PVGENVNAAV IARGTPGFSG 360
  361 ADLANLVNEA SLFAARASKR LVEMKEFELA KDKIMMGAER KTMVMSEKEK QNTAYHEAGH 420
  421 AIVGRVVPEH DPVYKVSIIP RGRALGVTMF LPEEDRYSLS KRALISQICS LYGGRIAEEM 480
  481 TLGFDGVTTG ASNDIMRASQ IARNMVTKWG LSEKLGPLMY AEEEGEVFLG RSAGSQHASV 540
  541 SGETAKLIDS EVRSIIDQCY ATAKQILTEN RDKLDAMAEA LMKYETIDAD QIDDIMAGRT 600
  601 PREPRDWDND AGTSGNQASQ GDRPESPIGG PAAQH

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle