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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|99867149
Protein type: Transmembrane
Type Confidence: 0.83
Topology Confidence: 0.78
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MISGKTIISV IHYEPCLCKP FAEIFTCFNF VFDDQYFHLA PRLAANVILL RPRSLSTDYS  60
   61 KNDNIVIILS PGKQRALGKV PLSILWTSFE PFTRSAWTRS VMFKLKLLSI STIFILAGCV 120
  121 SLAPEYQRPA APVPQQFSLS HNSLTPAVNG YQDTGWRNFF VDPQVTRLIG EALTNNRDLR 180
  181 MAALKVEEAR AQFNVTDADR YPQLNASSGI TYSGGLKGDK PTTQEYDARL ELSYELDFFG 240
  241 KLKNMSDADR QNYFASEEAR RAVHILLVSN VSQSYFSQQL AYEQLRIARE TLKNYQQSYA 300
  301 FVEQQLVTGS TNVLALEQAR GQIESTRAEI AKREGDLAQA NNALQLVLGT YRALPSEKGM 360
  361 KGGEIAPVKL PPNLSSQILL QRPDIMEAEY QLKAADANIG AARAAFFPSI TLTSGLSASS 420
  421 TELSSLFTSG SGMWNFIPKI EIPIFNAGRN KANLKLAEIR QQQSVVNYEQ KIQSAFKDVS 480
  481 DTLALRDSLS QQLESQQRYL DSLQITLQRA RGLYASGAVS YIEVLDAERS LFATQQTILD 540
  541 LTYSRQVNEI NLFTALGGGW VE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle