YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109017517
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNKLLLWVCV LTSLLEAFAH TDLSGKVFVF PRESVTDHVN LITQLEKPLQ NFTLCFRAYT  60
   61 DLSRPYSLFS YNTQGKDNEL VVYKERVGDY SLYIGRQKVT FKVIEKLPAP VHICVSWESS 120
  121 SGIAECWING TPLVKKGLRQ GYSVEAHPKI VLGQEQDSYG GKFDKSQSFV GEIGDLYMWN 180
  181 SVLPPEEILS AYQGTPVPAN ILDWRALNYE IKGYVIIKPL VWV

Type	Start	End	Confidence
Signal Peptide	1	19	0.99
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	223	0.99