YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109032659
Protein type:	Transmembrane
Type Confidence:	0.95
Topology Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALQLGRLSV GPCWRVARGG CRGLRAWSQC GGGGLRASSQ HSAARRICRP PGPAGTEQSR  60
   61 GLGHGPTARG GPWLGTGLAA ALAGLVGLAA AALGHVQRAE MVPKSSGTRA PSLGRPEEED 120
  121 ELARRCSSFM APPVTDLGEL RRRPGDMKTK MELLILETQA QVCQALAQVD GGASFSVDRW 180
  181 ERKEGGGGIS CVLQDGCVFE KAGVSISVVH GNLSEEAAKQ MRSRGKVLKT KDGKLPFCAM 240
  241 GVSSVIHPKN PHAPTIHFNY RYFEVEEADG NKQWWFGGGC DLTPTYLNQE DAVHFHRTLK 300
  301 EACDQHGPEL YPKFKKWCDD YFFIAHRGER RGIGGIFFDD LDSPSKEEVF RFVQSCAKAV 360
  361 VPSYIPLVKK HCDDSFTPQE KLWQQLRRGR YVEFNLLYDR GTKFGLFTPG SRIESILMSL 420
  421 PLTARWEYMH SPSENSKEAE ILEVLRHPRD WVC

Type	Start	End	Confidence
Cytoplasmic	1	72	0.85
Transmembrane Helix	73	96	0.86
Non-Cytoplasmic	97	453	0.92