YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109048836
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLALLVLATV ALASAHHGGE HFEGEKVFRV NVEDENHINV IRNLASTTQI DFWKPDSVTQ  60
   61 IKPHSTVDFR VKAEDIVTVE NVLKQNELQH EVLISNLRNV VEAQFDSRVR ATGHSYVKYN 120
  121 KWETIEAWTQ QVATENPALI SRSVIGTTFE GRDIYLLKVG KAGQNKPAIF IDCGFHAREW 180
  181 ISPAFCQWFV REAVRTYGSE IQITELLNKL DFYILPVLNI DGYIYTWTKS RFWRKTRSTH 240
  241 AGSSCVGTDP NRNFDAGWCE IGASRNPCDE TYCGPAAESE KETKALADFI RNNLSSIKAY 300
  301 LTIHSYSQML IYPYSYAYKV GENNVELNTL AKAAVKELAS LHGTKYTYGP GATTIYPAAG 360
  361 GSDDWAYDQG IRYSFTLELR DTGRYGFALP ESQIRATCEE TLLAIKYIAS YVLEHLY

Type	Start	End	Confidence
Signal Peptide	1	15	0.99
N-region	1	6
H-region	7	12
C-region	13	15
Cleavage Site	15	16
Non-Cytoplasmic	16	417	0.99