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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109066252
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.95
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRWTCRELSD DALEPSSIPN PVSSRESCPE SLLLPQRIHL CSDIVGIPAD VRAEQQGTLF  60
   61 PTALDIVQEN GASAWAKVSL TRGCEGLATA QLAAQDTGCP QGSALALTFG HRPSPLHHAA 120
  121 LPRPRPIFHC SRLSVPAPPR RAAAGRTDGG AAPLCGVRML PGRQCRREAS RVAPPRPRPA 180
  181 PPRPSHAAVR GPAGGLTCAE RARVLVVAAV VLAPAQVEAV TQAGLGAGAA HVVQQHGAAA 240
  241 VAEVAQARGA QRGPAARLTA GHARVRKVPV IVAHGAPTPG HWRRAPPTCP ASAHRSPPKA 300
  301 PRTRTCAECS RVLVVATVVH APAQALAGCQ AGLAAFAMHV VQQDVPRAIA KEGVGGGGHG 360
  361 RSAAQLTTDH SSIRKPPVVV THGAPQATVQ DLHSALTQGG ASRAETSVQP VLVECREATL 420
  421 LVTVSKDLFG TGKLIRAADL TLGPEACEPL VSMDTEDVVR FEVGLHECGS SMQVTDDALV 480
  481 YSTFLLHNPR PVGNLSIVRT NRAEIPIECR YPRQGNVSSQ AILPTWLPFR TTVFSEEKLT 540
  541 FSLRLMEENW NAEKRSPTFH LGDAAHLQAE IHTGSHVPLR LFVDHCVATP TPDQNASPYH 600
  601 TIVDFHGCLV DGLTDASSAF KVPRPGPDTL QFTVDVFHFA NDSRNMIYIT CHLKAIPAEQ 660
  661 EPDELNKACS FSKSSNSWFP VEGPADICQC CSKGDCGTPS HSRRQPHVVS QWSRSASRNR 720
  721 RHVTEEADIT VGPLIFLDRS ADYEVEQWAL PADTSVLLLG IGLAVVASLT LTAVILIFTR 780
  781 RWRTASRSVS VSQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle