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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109082893
Protein type: Globular with Signal Peptide
Type Confidence: 0.89
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSARKKMAA MAVGGAGGSR VSSGRDLNCV PEIADTLGAV AKQGFDFLCM PVFHPRFKRE  60
   61 FIQEPAKNRP GPQTRSDLLL SGRDWNTLIV GKLSPWIRPD SKVEKIRRNS EAAMLQELNF 120
  121 GAYLGLPAFL LPLNQEDNTN LARVLTNHIH TGHHSSMFWM RVPLVAPEDL RDDIIENAPT 180
  181 THTEEYSGEE KTWMWWHNFR TLCDYSKRIA VALEIGADLP SNHVIDRWLG EPIKAAILPT 240
  241 SIFLTNKKGF PVLSKMHQRL IFRLLKLEVQ FIITGTNHHS EKEFCSYLQY LEYLSQNRPP 300
  301 PNAYELFAKG YEDYLQSPLQ PLMDNLESQT YEVFEKDPIK YSQYQQAIYK CLLDRVPEEE 360
  361 KDTNVQVLMV LGAGRGPLVN ASLRAAKQAD RRIKLYAVEK NPNAVVTLEN WQFEEWGSQV 420
  421 TVVSSDMREW VAPEKADIIV SELLGSFADN ELSPECLDGA QHFLKDDGVS IPGEYTSFLA 480
  481 PISSSKLYNE VRACREKDRD PEAQFEMPYV VRLHNFHQLS APQPCFTFSH PNRDPMIDNN 540
  541 RYCTLEFPVE VNTVLHGFAG YFETVLYQDI TLSIRPETHS PGMFSWFPIL FPIKQPITVR 600
  601 EGQTICVRFW RCSNSKKVWY EWAVTAPVCS AIHNPTGRSY TIGL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle