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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109086033
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.70
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSQAAWYPR ELSLNASGDE EFSELIFMLD SPNLVTCYTS TTPQYWVPPC HHFHIPRALR  60
   61 GGTPTRIHET TQRSDANHPG SGSAPPALNA PVGEGSAASR KPAGRDAASW WSPAPGVPGQ 120
  121 PSRIGISCLF PASWHFSISP VGCPRILNTN LRQIIVISVL AAAVSLLYFS VVIIRNKYGR 180
  181 LTRDKKFQRY LARVTDIEAT DTNNPSVNYG IVVDCGSSGS RVFVYCWPRH NGNPRDLLDI 240
  241 RQMRDKNRKP VVMKIKPGIS EFATSPEKVS DYISPLLNFA AEHVPRAKHK ETPLYILCTA 300
  301 GMRILPESQQ KAILEDLLTD IPVHFDFLFS DSHAEVISGK QEGVYAWIGI NFVLGRFEHI 360
  361 EDDDEAVVEV NIPGSESSEA IVRKRTAGIL DMGGVSTQIA YEVPKTEEVA KNLLAEFNLG 420
  421 CDVHQTEHVY RVYVATFLGF GGNAARQRYE DRIFANTIQK NRLLGKQTGL TPDMPYLDPC 480
  481 LPLDIKDEIQ QNGQTIYLRG TGDFDLCRET IQPFMNKTNE TQTSLNGVYQ PPIHFQNSEF 540
  541 YGFSEFYYCT EDVLRMGGDY NAAKFTKAAK DYCATKWSIL RERFDRGLYA SHADLHRLKY 600
  601 QCFKSAWMFE VFHRGFSFPV NYKSLKTALQ VYDKEVQWTL GAILYRTRFL PLRDIQQEAF 660
  661 RASHSHWRGV SFVYNHYLFS GCFLVVLLAI LLYLLRLRRI HRRTLRNGSA AALWMEEGLP 720
  721 TQNAAGTL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle